public class MCMCXML extends RepositoryStorageXML implements MCMCStorage
nickname, reposListeners, transferAgent
Constructor and Description |
---|
MCMCXML(RepositoryConnectivity conn,
java.lang.String storagename) |
Modifier and Type | Method and Description |
---|---|
void |
addMCMCRun(java.lang.String name)
Adds the named run to the list of associated runs.
|
void |
clearMCMCRuns() |
java.lang.Class |
getDOMStorageClass()
Returns a DOM storage variant of this storage instance.
|
StatisticalModelStorage |
getLikelihoodStorage() |
java.lang.String |
getLikelihoodStorageConfigClass() |
java.lang.String |
getLikelihoodStorageNickname() |
java.lang.String |
getLikelihoodStorageRepositoryName() |
java.util.Vector |
getMCMCRunNames()
Gets a list of names of runs associated with this MCMC configuration.
|
java.lang.String |
getPriorStorageConfigClass() |
java.lang.String |
getPriorStorageNickname() |
java.lang.String |
getPriorStorageRepositoryName() |
RepositoryElement |
getReferenceParameterSetRepositoryElement() |
java.lang.Class |
getStorageTransferAgentClass()
This method should be overridden by subclasses wanting to extend the transfer method.
|
void |
removeMCMCRun(java.lang.String name)
Removes the named run from the list of associated runs.
|
void |
setLikelihoodStorageConfigClass(java.lang.String cls) |
void |
setLikelihoodStorageNickname(java.lang.String cls) |
void |
setLikelihoodStorageRepositoryName(java.lang.String cls) |
void |
setPriorStorageConfigClass(java.lang.String cls) |
void |
setPriorStorageNickname(java.lang.String cls) |
void |
setPriorStorageRepositoryName(java.lang.String cls) |
void |
setReferenceParameterSetRepositoryElement(RepositoryElement elem) |
copyStorage, getComment, getCreatedBy, getCreatedOn, getDefaultGraphicalEditorClass, getDOM, getEnabled, getNickname, getStorage, getXMLDirectory, getXMLFilename, setComment, setCreatedBy, setCreatedOn, setEnabled, setNickname, transferStorage, writeXML
addRepositoryListener, afterCopyStorage, afterTransferStorage, beforeCopyStorage, beforeTransferStorage, copyStorageCommands, getStorageCalculationsAgentClass, removeRepositoryListener, show, transferStorageCommands
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
addRepositoryListener, getComment, getCreatedBy, getCreatedOn, getDefaultGraphicalEditorClass, getEnabled, getNickname, removeRepositoryListener, setComment, setCreatedBy, setCreatedOn, setEnabled, setNickname
afterCopyStorage, afterTransferStorage, beforeCopyStorage, beforeTransferStorage, copyStorage, copyStorageCommands, transferStorage, transferStorageCommands
public MCMCXML(RepositoryConnectivity conn, java.lang.String storagename)
public java.lang.Class getStorageTransferAgentClass()
AbstractRepositoryStorage
getStorageTransferAgentClass
in class AbstractRepositoryStorage
public java.lang.Class getDOMStorageClass()
AbstractRepositoryStorage
getDOMStorageClass
in interface DOMStorable
getDOMStorageClass
in class RepositoryStorageXML
public RepositoryElement getReferenceParameterSetRepositoryElement()
getReferenceParameterSetRepositoryElement
in interface MCMCStorage
public void setReferenceParameterSetRepositoryElement(RepositoryElement elem)
setReferenceParameterSetRepositoryElement
in interface MCMCStorage
public void setLikelihoodStorageConfigClass(java.lang.String cls)
setLikelihoodStorageConfigClass
in interface MCMCStorage
public java.lang.String getLikelihoodStorageConfigClass()
getLikelihoodStorageConfigClass
in interface MCMCStorage
public void setLikelihoodStorageRepositoryName(java.lang.String cls)
setLikelihoodStorageRepositoryName
in interface MCMCStorage
public java.lang.String getLikelihoodStorageRepositoryName()
getLikelihoodStorageRepositoryName
in interface MCMCStorage
public void setLikelihoodStorageNickname(java.lang.String cls)
setLikelihoodStorageNickname
in interface MCMCStorage
public java.lang.String getLikelihoodStorageNickname()
getLikelihoodStorageNickname
in interface MCMCStorage
public void setPriorStorageConfigClass(java.lang.String cls)
setPriorStorageConfigClass
in interface MCMCStorage
public java.lang.String getPriorStorageConfigClass()
getPriorStorageConfigClass
in interface MCMCStorage
public void setPriorStorageRepositoryName(java.lang.String cls)
setPriorStorageRepositoryName
in interface MCMCStorage
public java.lang.String getPriorStorageRepositoryName()
getPriorStorageRepositoryName
in interface MCMCStorage
public void setPriorStorageNickname(java.lang.String cls)
setPriorStorageNickname
in interface MCMCStorage
public java.lang.String getPriorStorageNickname()
getPriorStorageNickname
in interface MCMCStorage
public StatisticalModelStorage getLikelihoodStorage()
getLikelihoodStorage
in interface MCMCStorage
public void addMCMCRun(java.lang.String name)
addMCMCRun
in interface MCMCStorage
public void removeMCMCRun(java.lang.String name)
removeMCMCRun
in interface MCMCStorage
public void clearMCMCRuns()
clearMCMCRuns
in interface MCMCStorage
public java.util.Vector getMCMCRunNames()
getMCMCRunNames
in interface MCMCStorage
Copyright © 2011, 2013. Daniel P. Dougherty