Uses of Class
com.mockturtlesolutions.snifflib.functions.AbstractFunction

Packages that use AbstractFunction

Package	Description
com.mockturtlesolutions.snifflib.functions	Contains standard classes and interfaces for defining functions.
com.mockturtlesolutions.snifflib.functions.transcendental	Base clases and interfaces for transcendental functions.
com.mockturtlesolutions.snifflib.integration	Contains standard classes and interfaces for performing integration.
com.mockturtlesolutions.snifflib.invprobs	Contains standard classes and interfaces for solving statistical inverse problems.
com.mockturtlesolutions.snifflib.pde	Contains standard classes and interfaces for numerical solution of partial differential equations.
com.mockturtlesolutions.snifflib.stats	Contains standard classes and interfaces for statistical storage classes and algorithms.
com.mockturtlesolutions.snifflib.testfun	Contains some typical functions useful for testing various algorithms.
com.mockturtlesolutions.snifflib.util	Contains some utility classes providing methods of broad applicability.
com.mockturtlesolutions.snifflib.xppauttools.database	Base classes for the repository storage framework of xppauttools

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.functions

Subclasses of AbstractFunction in com.mockturtlesolutions.snifflib.functions

Modifier and Type	Class and Description
class	MultiMultiFunction
class	MultiUniFunction
class	UniMultiFunction
class	UniUniFunction

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.functions.transcendental

Subclasses of AbstractFunction in com.mockturtlesolutions.snifflib.functions.transcendental

Modifier and Type	Class and Description
class	Exp
class	Log
class	Log10

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.integration

Subclasses of AbstractFunction in com.mockturtlesolutions.snifflib.integration

Modifier and Type	Class and Description
class	Exponential
class	Logistic
class	Ode The getDeriv() and related methods do not accept input arguments.
class	OdeModel This model wraps an OdeSolver and extends the StatisticalModel.

Fields in com.mockturtlesolutions.snifflib.integration declared as AbstractFunction

Modifier and Type	Field and Description
protected AbstractFunction	AnalyticQuadratureAlgorithm.Function

Methods in com.mockturtlesolutions.snifflib.integration that return AbstractFunction

Modifier and Type	Method and Description
AbstractFunction	FunQuad.getFunction() Get the function being integrated.
AbstractFunction	AnalyticQuadratureAlgorithm.getFunction() Get the function being integrated.

Methods in com.mockturtlesolutions.snifflib.integration with parameters of type AbstractFunction

Modifier and Type	Method and Description
void	FunQuad.setFunction(AbstractFunction F) Set the function being integrated.
void	AnalyticQuadratureAlgorithm.setFunction(AbstractFunction F) Set the function being integrated.

Constructors in com.mockturtlesolutions.snifflib.integration with parameters of type AbstractFunction

Constructor and Description
FunQuad(AbstractFunction FUN, DblMatrix L, DblMatrix U) Integrate function from the upper to the lower limit of integration.
FunQuad(AbstractFunction FUN, double L, double U) Integrate function from the upper to the lower limit of integration.
FunQuad(AbstractFunction FUN, int L, int U) Integrate function from the upper to the lower limit of integration.

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.invprobs

Subclasses of AbstractFunction in com.mockturtlesolutions.snifflib.invprobs

Modifier and Type	Class and Description
class	AbstractProposalDistribution A standard approach to the proposal distribution called for in Metropolis-Hastings Markov Chain Monte-Carlo.
class	BayesianLinear This is a simple extension of Linear appropriate for full Bayesian linear regression under the assumption of independent and identically distributed Gaussian errors and uniform prior.
class	DistributedStatisticalModel Provides a transparent extension of StatisticalModel for cases where parameters and/or data may be distributed across one or more other classes (e.g.
class	GaussianProposal A convenience class for setting up a proposal distribution which is Gaussian for all parameters in a companion StatisticalModel.
class	StatisticalModel This is a class which implements NamedParameters can make predictions as a function of those parameters and can have its parameters optimized.

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.pde

Fields in com.mockturtlesolutions.snifflib.pde declared as AbstractFunction

Modifier and Type	Field and Description
protected AbstractFunction	DefaultDiffusionCoefficient.function
protected AbstractFunction	DefaultBoundaryCondition.function

Constructors in com.mockturtlesolutions.snifflib.pde with parameters of type AbstractFunction

Constructor and Description
BoundaryValueCondition(AbstractFunction fun)
DefaultBoundaryCondition(AbstractFunction fun)
DefaultDiffusionCoefficient(AbstractFunction fun)
DirichletCondition(AbstractFunction fun)
NeummanCondition(AbstractFunction fun)

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.stats

Subclasses of AbstractFunction in com.mockturtlesolutions.snifflib.stats

Modifier and Type	Class and Description
class	FCDF
class	NormPDF

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.testfun

Subclasses of AbstractFunction in com.mockturtlesolutions.snifflib.testfun

Modifier and Type	Class and Description
class	Constant
class	Cubic
class	HollingI
class	HollingII
class	HollingIII
class	Linear
class	MichaelisMenten
class	Quadratic

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.util

Subclasses of AbstractFunction in com.mockturtlesolutions.snifflib.util

Modifier and Type	Class and Description
class	AbstractGammaAlgorithm Gamma function evaluation.
class	AbstractIncBetaAlgorithm Incomplete Beta function.
class	AbstractLogGammaAlgorithm Gamma function evaluation.
class	NRIncBetaAlgorithm Algorithm is based on Numerical Recipies in Fortran p.220-221.
class	NRLogGammaAlgorithm Algorithm is based on Numerical Recipies in Fortran.
class	TothGammaAlgorithm Algorithm is based on an approximation presented by Viktor T.

Uses of AbstractFunction in com.mockturtlesolutions.snifflib.xppauttools.database

Subclasses of AbstractFunction in com.mockturtlesolutions.snifflib.xppauttools.database

Modifier and Type	Class and Description
class	XppOdeStatisticalModel