Uses of Class
com.mockturtlesolutions.snifflib.reposconfig.database.RepositoryElement

Packages that use RepositoryElement

Package	Description
com.mockturtlesolutions.snifflib.mcmctools.database	Base classes for the repository storage framework of the mcmctools package.
com.mockturtlesolutions.snifflib.mcmctools.workbench	Graphical interface classes for the repository storage framework of the mcmctools package.
com.mockturtlesolutions.snifflib.reposconfig.database	Base classes for the repository storage framework of the reposconfig package.
com.mockturtlesolutions.snifflib.reposconfig.graphical	Graphical access to repository storage methods and storage.
com.mockturtlesolutions.snifflib.statmodeltools.database	Base classes for the repository storage framework of the statmodeltools package.
com.mockturtlesolutions.snifflib.statmodeltools.workbench	Graphical interface classes for the repository storage framework of the statmodeltools package.
com.mockturtlesolutions.snifflib.util.database	Base classes for the repository storage framework of the util package.

Uses of RepositoryElement in com.mockturtlesolutions.snifflib.mcmctools.database

Methods in com.mockturtlesolutions.snifflib.mcmctools.database that return RepositoryElement

Modifier and Type	Method and Description
RepositoryElement	MCMCRunPostgreSQL.getALIKERepositoryElement()
RepositoryElement	MCMCRunDOM.getALIKERepositoryElement()
RepositoryElement	MCMCRunSQL.getALIKERepositoryElement()
RepositoryElement	MCMCRunXML.getALIKERepositoryElement()
RepositoryElement	MCMCRunStorage.getALIKERepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getAPRIORRepositoryElement()
RepositoryElement	MCMCRunDOM.getAPRIORRepositoryElement()
RepositoryElement	MCMCRunSQL.getAPRIORRepositoryElement()
RepositoryElement	MCMCRunXML.getAPRIORRepositoryElement()
RepositoryElement	MCMCRunStorage.getAPRIORRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getAPROPRepositoryElement()
RepositoryElement	MCMCRunDOM.getAPROPRepositoryElement()
RepositoryElement	MCMCRunSQL.getAPROPRepositoryElement()
RepositoryElement	MCMCRunXML.getAPROPRepositoryElement()
RepositoryElement	MCMCRunStorage.getAPROPRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getBLIKERepositoryElement()
RepositoryElement	MCMCRunDOM.getBLIKERepositoryElement()
RepositoryElement	MCMCRunSQL.getBLIKERepositoryElement()
RepositoryElement	MCMCRunXML.getBLIKERepositoryElement()
RepositoryElement	MCMCRunStorage.getBLIKERepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getBPRIORRepositoryElement()
RepositoryElement	MCMCRunDOM.getBPRIORRepositoryElement()
RepositoryElement	MCMCRunSQL.getBPRIORRepositoryElement()
RepositoryElement	MCMCRunXML.getBPRIORRepositoryElement()
RepositoryElement	MCMCRunStorage.getBPRIORRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getBPROPRepositoryElement()
RepositoryElement	MCMCRunDOM.getBPROPRepositoryElement()
RepositoryElement	MCMCRunSQL.getBPROPRepositoryElement()
RepositoryElement	MCMCRunXML.getBPROPRepositoryElement()
RepositoryElement	MCMCRunStorage.getBPROPRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getCandidateObjectRepositoryElement()
RepositoryElement	MCMCRunDOM.getCandidateObjectRepositoryElement()
RepositoryElement	MCMCRunSQL.getCandidateObjectRepositoryElement()
RepositoryElement	MCMCRunXML.getCandidateObjectRepositoryElement()
RepositoryElement	MCMCRunStorage.getCandidateObjectRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getCandidateParameterRepositoryElement()
RepositoryElement	MCMCRunDOM.getCandidateParameterRepositoryElement()
RepositoryElement	MCMCRunSQL.getCandidateParameterRepositoryElement()
RepositoryElement	MCMCRunXML.getCandidateParameterRepositoryElement()
RepositoryElement	MCMCRunStorage.getCandidateParameterRepositoryElement()
RepositoryElement	MCMCTraceDOM.getElement(int j)
RepositoryElement	MCMCTraceSQL.getElement(int j)
RepositoryElement	MCMCTracePostgreSQL.getElement(int j)
RepositoryElement	MCMCTraceXML.getElement(int j)
RepositoryElement	MCMCTraceStorage.getElement(int j)
RepositoryElement	WedgeStorage.getInitializerScript()
RepositoryElement	WedgePostgreSQL.getInitializerScript()
RepositoryElement	WedgeDOM.getInitializerScript()
RepositoryElement	WedgeXML.getInitializerScript()
RepositoryElement	WedgeStorage.getLikelihoodScript()
RepositoryElement	WedgePostgreSQL.getLikelihoodScript()
RepositoryElement	WedgeDOM.getLikelihoodScript()
RepositoryElement	WedgeXML.getLikelihoodScript()
RepositoryElement	WedgeStorage.getMCMCRun()
RepositoryElement	WedgePostgreSQL.getMCMCRun()
RepositoryElement	WedgeDOM.getMCMCRun()
RepositoryElement	WedgeXML.getMCMCRun()
RepositoryElement	MCMCRunPostgreSQL.getMCMCSamplerRepositoryElement()
RepositoryElement	MCMCRunDOM.getMCMCSamplerRepositoryElement()
RepositoryElement	MCMCRunSQL.getMCMCSamplerRepositoryElement()
RepositoryElement	MCMCRunXML.getMCMCSamplerRepositoryElement()
RepositoryElement	MCMCRunStorage.getMCMCSamplerRepositoryElement()
RepositoryElement	ProposalDistributionDOM.getMixingParametersRepositoryElement()
RepositoryElement	ProposalDistributionStorage.getMixingParametersRepositoryElement()
RepositoryElement	ProposalDistributionSQL.getMixingParametersRepositoryElement()
RepositoryElement	ProposalDistributionXML.getMixingParametersRepositoryElement()
RepositoryElement	ProposalDistributionDOM.getNewParametersRepositoryElement()
RepositoryElement	ProposalDistributionStorage.getNewParametersRepositoryElement()
RepositoryElement	ProposalDistributionSQL.getNewParametersRepositoryElement()
RepositoryElement	ProposalDistributionXML.getNewParametersRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getObjectTraceRepositoryElement()
RepositoryElement	MCMCRunDOM.getObjectTraceRepositoryElement()
RepositoryElement	MCMCRunSQL.getObjectTraceRepositoryElement()
RepositoryElement	MCMCRunXML.getObjectTraceRepositoryElement()
RepositoryElement	MCMCRunStorage.getObjectTraceRepositoryElement()
RepositoryElement	ProposalDistributionDOM.getOldParametersRepositoryElement()
RepositoryElement	ProposalDistributionStorage.getOldParametersRepositoryElement()
RepositoryElement	ProposalDistributionSQL.getOldParametersRepositoryElement()
RepositoryElement	ProposalDistributionXML.getOldParametersRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getParameterTraceRepositoryElement()
RepositoryElement	MCMCRunDOM.getParameterTraceRepositoryElement()
RepositoryElement	MCMCRunSQL.getParameterTraceRepositoryElement()
RepositoryElement	MCMCRunXML.getParameterTraceRepositoryElement()
RepositoryElement	MCMCRunStorage.getParameterTraceRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getParentMCMCRepositoryElement()
RepositoryElement	MCMCRunDOM.getParentMCMCRepositoryElement()
RepositoryElement	MCMCRunSQL.getParentMCMCRepositoryElement()
RepositoryElement	MCMCRunXML.getParentMCMCRepositoryElement()
RepositoryElement	MCMCRunStorage.getParentMCMCRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getPreviousObjectRepositoryElement()
RepositoryElement	MCMCRunDOM.getPreviousObjectRepositoryElement()
RepositoryElement	MCMCRunSQL.getPreviousObjectRepositoryElement()
RepositoryElement	MCMCRunXML.getPreviousObjectRepositoryElement()
RepositoryElement	MCMCRunStorage.getPreviousObjectRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getPreviousParameterRepositoryElement()
RepositoryElement	MCMCRunDOM.getPreviousParameterRepositoryElement()
RepositoryElement	MCMCRunSQL.getPreviousParameterRepositoryElement()
RepositoryElement	MCMCRunXML.getPreviousParameterRepositoryElement()
RepositoryElement	MCMCRunStorage.getPreviousParameterRepositoryElement()
RepositoryElement	WedgeStorage.getPriorScript()
RepositoryElement	WedgePostgreSQL.getPriorScript()
RepositoryElement	WedgeDOM.getPriorScript()
RepositoryElement	WedgeXML.getPriorScript()
RepositoryElement	MCMCRunPostgreSQL.getProposalDistributionRepositoryElement()
RepositoryElement	MCMCRunDOM.getProposalDistributionRepositoryElement()
RepositoryElement	MCMCRunSQL.getProposalDistributionRepositoryElement()
RepositoryElement	MCMCRunXML.getProposalDistributionRepositoryElement()
RepositoryElement	MCMCRunStorage.getProposalDistributionRepositoryElement()
RepositoryElement	MCMCRunPostgreSQL.getReferenceParameterRepositoryElement()
RepositoryElement	MCMCRunDOM.getReferenceParameterRepositoryElement()
RepositoryElement	MCMCRunSQL.getReferenceParameterRepositoryElement()
RepositoryElement	MCMCRunXML.getReferenceParameterRepositoryElement()
RepositoryElement	MCMCRunStorage.getReferenceParameterRepositoryElement()
RepositoryElement	MCMCStorage.getReferenceParameterSetRepositoryElement()
RepositoryElement	MCMCSQL.getReferenceParameterSetRepositoryElement()
RepositoryElement	MCMCDOM.getReferenceParameterSetRepositoryElement()
RepositoryElement	MCMCPostgreSQL.getReferenceParameterSetRepositoryElement()
RepositoryElement	MCMCXML.getReferenceParameterSetRepositoryElement()
RepositoryElement	MCMCTraceDOM.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	MCMCTraceSQL.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	MCMCTracePostgreSQL.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	MCMCTraceXML.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	MCMCTraceStorage.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	MCMCTraceDOM.removeElement(int k)
RepositoryElement	MCMCTraceSQL.removeElement(int k)
RepositoryElement	MCMCTracePostgreSQL.removeElement(int k)
RepositoryElement	MCMCTraceXML.removeElement(int k)
RepositoryElement	MCMCTraceStorage.removeElement(int k)
RepositoryElement	MCMCTraceDOM.setElement(int j, RepositoryElement elem)
RepositoryElement	MCMCTraceSQL.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCTracePostgreSQL.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCTraceXML.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCTraceStorage.setElement(int k, RepositoryElement elem)

Methods in com.mockturtlesolutions.snifflib.mcmctools.database with parameters of type RepositoryElement

Modifier and Type	Method and Description
void	MCMCTraceDOM.addElementToTrace(int j, RepositoryElement elem)
void	MCMCTraceSQL.addElementToTrace(int j, RepositoryElement elem)
void	MCMCTracePostgreSQL.addElementToTrace(int j, RepositoryElement elem)
void	MCMCTraceXML.addElementToTrace(int j, RepositoryElement elem)
void	MCMCTraceStorage.addElementToTrace(int j, RepositoryElement elem)
boolean	MCMCTraceDOM.addElementToTrace(RepositoryElement elem)
boolean	MCMCTraceSQL.addElementToTrace(RepositoryElement elem)
boolean	MCMCTracePostgreSQL.addElementToTrace(RepositoryElement elem)
boolean	MCMCTraceXML.addElementToTrace(RepositoryElement elem)
boolean	MCMCTraceStorage.addElementToTrace(RepositoryElement elem)
void	MCMCTraceDOM.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	MCMCTraceSQL.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	MCMCTracePostgreSQL.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	MCMCTraceXML.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	MCMCTraceStorage.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	MCMCRunPostgreSQL.setALIKERepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setALIKERepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setALIKERepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setALIKERepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setALIKERepositoryElement(RepositoryElement el)
void	MCMCRunPostgreSQL.setAPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setAPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setAPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setAPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setAPRIORRepositoryElement(RepositoryElement el)
void	MCMCRunPostgreSQL.setAPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setAPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setAPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setAPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setAPROPRepositoryElement(RepositoryElement el)
void	MCMCRunPostgreSQL.setBLIKERepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setBLIKERepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setBLIKERepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setBLIKERepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setBLIKERepositoryElement(RepositoryElement el)
void	MCMCRunPostgreSQL.setBPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setBPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setBPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setBPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setBPRIORRepositoryElement(RepositoryElement el)
void	MCMCRunPostgreSQL.setBPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setBPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setBPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setBPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setBPROPRepositoryElement(RepositoryElement el)
void	MCMCRunPostgreSQL.setCandidateObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setCandidateObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setCandidateObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setCandidateObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setCandidateObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunPostgreSQL.setCandidateParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setCandidateParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setCandidateParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setCandidateParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setCandidateParameterRepositoryElement(RepositoryElement elem)
RepositoryElement	MCMCTraceDOM.setElement(int j, RepositoryElement elem)
RepositoryElement	MCMCTraceSQL.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCTracePostgreSQL.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCTraceXML.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCTraceStorage.setElement(int k, RepositoryElement elem)
void	WedgeStorage.setInitializerScript(RepositoryElement path)
void	WedgePostgreSQL.setInitializerScript(RepositoryElement path)
void	WedgeDOM.setInitializerScript(RepositoryElement elem)
void	WedgeXML.setInitializerScript(RepositoryElement path)
void	WedgeStorage.setLikelihoodScript(RepositoryElement path)
void	WedgePostgreSQL.setLikelihoodScript(RepositoryElement path)
void	WedgeDOM.setLikelihoodScript(RepositoryElement elem)
void	WedgeXML.setLikelihoodScript(RepositoryElement path)
void	WedgeStorage.setMCMCRun(RepositoryElement path)
void	WedgePostgreSQL.setMCMCRun(RepositoryElement path)
void	WedgeDOM.setMCMCRun(RepositoryElement elem)
void	WedgeXML.setMCMCRun(RepositoryElement path)
void	MCMCRunPostgreSQL.setMCMCSamplerRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setMCMCSamplerRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setMCMCSamplerRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setMCMCSamplerRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setMCMCSamplerRepositoryElement(RepositoryElement elem)
void	ProposalDistributionDOM.setMixingParametersRepositoryElement(RepositoryElement elem)
void	ProposalDistributionStorage.setMixingParametersRepositoryElement(RepositoryElement el)
void	ProposalDistributionSQL.setMixingParametersRepositoryElement(RepositoryElement el)
void	ProposalDistributionXML.setMixingParametersRepositoryElement(RepositoryElement elem)
void	ProposalDistributionDOM.setNewParametersRepositoryElement(RepositoryElement elem)
void	ProposalDistributionStorage.setNewParametersRepositoryElement(RepositoryElement el)
void	ProposalDistributionSQL.setNewParametersRepositoryElement(RepositoryElement el)
void	ProposalDistributionXML.setNewParametersRepositoryElement(RepositoryElement elem)
void	MCMCRunPostgreSQL.setObjectTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setObjectTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setObjectTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setObjectTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setObjectTraceRepositoryElement(RepositoryElement elem)
void	ProposalDistributionDOM.setOldParametersRepositoryElement(RepositoryElement elem)
void	ProposalDistributionStorage.setOldParametersRepositoryElement(RepositoryElement el)
void	ProposalDistributionSQL.setOldParametersRepositoryElement(RepositoryElement el)
void	ProposalDistributionXML.setOldParametersRepositoryElement(RepositoryElement elem)
void	MCMCRunPostgreSQL.setParameterTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setParameterTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setParameterTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setParameterTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setParameterTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunPostgreSQL.setParentMCMCRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setParentMCMCRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setParentMCMCRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setParentMCMCRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setParentMCMCRepositoryElement(RepositoryElement elem)
void	MCMCRunPostgreSQL.setPreviousObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setPreviousObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setPreviousObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setPreviousObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setPreviousObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunPostgreSQL.setPreviousParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setPreviousParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setPreviousParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setPreviousParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setPreviousParameterRepositoryElement(RepositoryElement elem)
void	WedgeStorage.setPriorScript(RepositoryElement path)
void	WedgePostgreSQL.setPriorScript(RepositoryElement path)
void	WedgeDOM.setPriorScript(RepositoryElement elem)
void	WedgeXML.setPriorScript(RepositoryElement path)
void	MCMCRunPostgreSQL.setProposalDistributionRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setProposalDistributionRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setProposalDistributionRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setProposalDistributionRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setProposalDistributionRepositoryElement(RepositoryElement elem)
void	MCMCRunPostgreSQL.setReferenceParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunDOM.setReferenceParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunSQL.setReferenceParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunXML.setReferenceParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunStorage.setReferenceParameterRepositoryElement(RepositoryElement elem)
void	MCMCStorage.setReferenceParameterSetRepositoryElement(RepositoryElement elem)
void	MCMCSQL.setReferenceParameterSetRepositoryElement(RepositoryElement elem)
void	MCMCDOM.setReferenceParameterSetRepositoryElement(RepositoryElement elem)
void	MCMCPostgreSQL.setReferenceParameterSetRepositoryElement(RepositoryElement elem)
void	MCMCXML.setReferenceParameterSetRepositoryElement(RepositoryElement elem)

Constructors in com.mockturtlesolutions.snifflib.mcmctools.database with parameters of type RepositoryElement

Constructor and Description
MCMCServerThread(RepositoryElement mcmcrun)

Uses of RepositoryElement in com.mockturtlesolutions.snifflib.mcmctools.workbench

Methods in com.mockturtlesolutions.snifflib.mcmctools.workbench that return RepositoryElement

Modifier and Type	Method and Description
RepositoryElement	MCMCRunPanel.getALIKERepositoryElement()
RepositoryElement	MCMCRunFrame.getALIKERepositoryElement()
RepositoryElement	MCMCRunPanel.getAPRIORRepositoryElement()
RepositoryElement	MCMCRunFrame.getAPRIORRepositoryElement()
RepositoryElement	MCMCRunPanel.getAPROPRepositoryElement()
RepositoryElement	MCMCRunFrame.getAPROPRepositoryElement()
RepositoryElement	MCMCRunPanel.getBLIKERepositoryElement()
RepositoryElement	MCMCRunFrame.getBLIKERepositoryElement()
RepositoryElement	MCMCRunPanel.getBPRIORRepositoryElement()
RepositoryElement	MCMCRunFrame.getBPRIORRepositoryElement()
RepositoryElement	MCMCRunPanel.getBPROPRepositoryElement()
RepositoryElement	MCMCRunFrame.getBPROPRepositoryElement()
RepositoryElement	MCMCRunPanel.getCandidateObjectRepositoryElement()
RepositoryElement	MCMCRunFrame.getCandidateObjectRepositoryElement()
RepositoryElement	MCMCFrame.getCandidateObjectRepositoryElement()
RepositoryElement	MCMCRunPanel.getCandidateParameterRepositoryElement()
RepositoryElement	MCMCRunFrame.getCandidateParameterRepositoryElement()
RepositoryElement	MCMCFrame.getCandidateParameterRepositoryElement()
RepositoryElement	MCMCTraceFrame.getElement(int j)
RepositoryElement	MCMCTraceFrame.MCMCTraceTableModel.getElement(int j)
RepositoryElement	MCMCFrame.MCMCRunTableModel.getElement(int j)
RepositoryElement	WedgeFrame.getInitializerScript()
RepositoryElement	WedgePanel.getInitializerScript()
RepositoryElement	WedgeFrame.getLikelihoodScript()
RepositoryElement	WedgePanel.getLikelihoodScript()
RepositoryElement	WedgeFrame.getMCMCRun()
RepositoryElement	WedgePanel.getMCMCRun()
RepositoryElement	MCMCRunPanel.getMCMCSamplerRepositoryElement()
RepositoryElement	MCMCRunFrame.getMCMCSamplerRepositoryElement()
RepositoryElement	MCMCFrame.getMCMCSamplerRepositoryElement()
RepositoryElement	GaussianProposalFrame.getMixingParametersRepositoryElement()
RepositoryElement	GaussianProposalPanel.getMixingParametersRepositoryElement()
RepositoryElement	GaussianProposalFrame.getNewParametersRepositoryElement()
RepositoryElement	GaussianProposalPanel.getNewParametersRepositoryElement()
RepositoryElement	MCMCRunPanel.getObjectTraceRepositoryElement()
RepositoryElement	MCMCRunFrame.getObjectTraceRepositoryElement()
RepositoryElement	GaussianProposalFrame.getOldParametersRepositoryElement()
RepositoryElement	GaussianProposalPanel.getOldParametersRepositoryElement()
RepositoryElement	MCMCRunPanel.getParameterTraceRepositoryElement()
RepositoryElement	MCMCRunFrame.getParameterTraceRepositoryElement()
RepositoryElement	MCMCRunPanel.getParentMCMCRepositoryElement()
RepositoryElement	MCMCRunFrame.getParentMCMCRepositoryElement()
RepositoryElement	MCMCRunPanel.getPreviousObjectRepositoryElement()
RepositoryElement	MCMCRunFrame.getPreviousObjectRepositoryElement()
RepositoryElement	MCMCFrame.getPreviousObjectRepositoryElement()
RepositoryElement	MCMCRunPanel.getPreviousParameterRepositoryElement()
RepositoryElement	MCMCRunFrame.getPreviousParameterRepositoryElement()
RepositoryElement	MCMCFrame.getPreviousParameterRepositoryElement()
RepositoryElement	WedgeFrame.getPriorScript()
RepositoryElement	WedgePanel.getPriorScript()
RepositoryElement	MCMCRunPanel.getProposalDistributionRepositoryElement()
RepositoryElement	MCMCRunFrame.getProposalDistributionRepositoryElement()
RepositoryElement	MCMCRunPanel.getReferenceParameterRepositoryElement()
RepositoryElement	MCMCRunFrame.getReferenceParameterRepositoryElement()
RepositoryElement	MCMCFrame.getReferenceParameterSetRepositoryElement()
RepositoryElement	MCMCTraceFrame.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	MCMCTraceFrame.removeElement(int k)
RepositoryElement	MCMCTraceFrame.MCMCTraceTableModel.removeElement(int k)
RepositoryElement	MCMCFrame.MCMCRunTableModel.removeElement(int k)
RepositoryElement	MCMCTraceFrame.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCTraceFrame.MCMCTraceTableModel.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCFrame.MCMCRunTableModel.setElement(int k, RepositoryElement elem)

Methods in com.mockturtlesolutions.snifflib.mcmctools.workbench with parameters of type RepositoryElement

Modifier and Type	Method and Description
void	MCMCFrame.MCMCRunTableModel.addElementIntoRuns(int j, RepositoryElement elem)
void	MCMCTraceFrame.MCMCTraceTableModel.addElementIntoTrace(int j, RepositoryElement elem)
boolean	MCMCFrame.MCMCRunTableModel.addElementToRuns(RepositoryElement elem)
void	MCMCTraceFrame.addElementToTrace(int j, RepositoryElement elem)
boolean	MCMCTraceFrame.addElementToTrace(RepositoryElement elem)
boolean	MCMCTraceFrame.MCMCTraceTableModel.addElementToTrace(RepositoryElement elem)
void	MCMCTraceFrame.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	MCMCRunPanel.setALIKERepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setALIKERepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setAPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setAPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setAPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setAPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setBLIKERepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setBLIKERepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setBPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setBPRIORRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setBPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setBPROPRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setCandidateObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setCandidateObjectRepositoryElement(RepositoryElement elem)
void	MCMCFrame.setCandidateObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setCandidateParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setCandidateParameterRepositoryElement(RepositoryElement elem)
void	MCMCFrame.setCandidateParameterRepositoryElement(RepositoryElement elem)
RepositoryElement	MCMCTraceFrame.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCTraceFrame.MCMCTraceTableModel.setElement(int k, RepositoryElement elem)
RepositoryElement	MCMCFrame.MCMCRunTableModel.setElement(int k, RepositoryElement elem)
void	WedgeFrame.setInitializerScript(RepositoryElement path)
void	WedgePanel.setInitializerScript(RepositoryElement path)
void	WedgeFrame.setLikelihoodScript(RepositoryElement path)
void	WedgePanel.setLikelihoodScript(RepositoryElement path)
void	WedgeFrame.setMCMCRun(RepositoryElement path)
void	WedgePanel.setMCMCRun(RepositoryElement path)
void	MCMCRunPanel.setMCMCSamplerRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setMCMCSamplerRepositoryElement(RepositoryElement elem)
void	MCMCFrame.setMCMCSamplerRepositoryElement(RepositoryElement elem)
void	GaussianProposalFrame.setMixingParametersRepositoryElement(RepositoryElement el)
void	GaussianProposalPanel.setMixingParametersRepositoryElement(RepositoryElement el)
void	GaussianProposalFrame.setNewParametersRepositoryElement(RepositoryElement el)
void	GaussianProposalPanel.setNewParametersRepositoryElement(RepositoryElement el)
void	MCMCRunPanel.setObjectTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setObjectTraceRepositoryElement(RepositoryElement elem)
void	GaussianProposalFrame.setOldParametersRepositoryElement(RepositoryElement el)
void	GaussianProposalPanel.setOldParametersRepositoryElement(RepositoryElement el)
void	MCMCRunPanel.setParameterTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setParameterTraceRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setParentMCMCRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setParentMCMCRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setPreviousObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setPreviousObjectRepositoryElement(RepositoryElement elem)
void	MCMCFrame.setPreviousObjectRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setPreviousParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setPreviousParameterRepositoryElement(RepositoryElement elem)
void	MCMCFrame.setPreviousParameterRepositoryElement(RepositoryElement elem)
void	WedgeFrame.setPriorScript(RepositoryElement path)
void	WedgePanel.setPriorScript(RepositoryElement path)
void	MCMCRunPanel.setProposalDistributionRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setProposalDistributionRepositoryElement(RepositoryElement elem)
void	MCMCRunPanel.setReferenceParameterRepositoryElement(RepositoryElement elem)
void	MCMCRunFrame.setReferenceParameterRepositoryElement(RepositoryElement elem)
void	MCMCFrame.setReferenceParameterSetRepositoryElement(RepositoryElement elem)

Uses of RepositoryElement in com.mockturtlesolutions.snifflib.reposconfig.database

Methods in com.mockturtlesolutions.snifflib.reposconfig.database with parameters of type RepositoryElement

Modifier and Type	Method and Description
RepositoryStorage	RepositoryStorageDOM.getStorage(RepositoryElement elem)
RepositoryStorage	RepositoryStorageSQL.getStorage(RepositoryElement elem)
RepositoryStorage	RepositoryStorageSQLite.getStorage(RepositoryElement elem)
RepositoryStorage	RepositoryStoragePostgreSQL.getStorage(RepositoryElement elem)
RepositoryStorage	RepositoryStorageXML.getStorage(RepositoryElement elem)

Uses of RepositoryElement in com.mockturtlesolutions.snifflib.reposconfig.graphical

Methods in com.mockturtlesolutions.snifflib.reposconfig.graphical that return RepositoryElement

Modifier and Type	Method and Description
RepositoryElement	DefaultMultiConfigNameSelectorGroup.getRepositoryElement()

Methods in com.mockturtlesolutions.snifflib.reposconfig.graphical with parameters of type RepositoryElement

Modifier and Type	Method and Description
void	DefaultMultiConfigNameSelectorGroup.setRepositoryElement(RepositoryElement el)

Uses of RepositoryElement in com.mockturtlesolutions.snifflib.statmodeltools.database

Methods in com.mockturtlesolutions.snifflib.statmodeltools.database that return RepositoryElement

Modifier and Type	Method and Description
RepositoryElement	CanonicalSetPostgreSQL.getElement(int j)
RepositoryElement	CanonicalSetXML.getElement(int j)
RepositoryElement	CanonicalSetSQL.getElement(int j)
RepositoryElement	CanonicalSetStorage.getElement(int j)
RepositoryElement	CanonicalSetDOM.getElement(int j)
RepositoryElement	CanonicalSetPostgreSQL.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	CanonicalSetXML.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	CanonicalSetSQL.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	CanonicalSetStorage.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	CanonicalSetDOM.poll() Retrieves and removes the first RepositoryElement in this trace, or null if this queue is empty.
RepositoryElement	CanonicalSetPostgreSQL.removeElement(int k)
RepositoryElement	CanonicalSetXML.removeElement(int k)
RepositoryElement	CanonicalSetSQL.removeElement(int k)
RepositoryElement	CanonicalSetStorage.removeElement(int k)
RepositoryElement	CanonicalSetDOM.removeElement(int k)
RepositoryElement	CanonicalSetPostgreSQL.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetXML.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetSQL.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetStorage.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetDOM.setElement(int j, RepositoryElement elem)

Methods in com.mockturtlesolutions.snifflib.statmodeltools.database with parameters of type RepositoryElement

Modifier and Type	Method and Description
void	CanonicalSetPostgreSQL.addElementToSet(int j, RepositoryElement elem)
void	CanonicalSetXML.addElementToSet(int j, RepositoryElement elem)
void	CanonicalSetSQL.addElementToSet(int j, RepositoryElement elem)
void	CanonicalSetStorage.addElementToSet(int j, RepositoryElement elem)
void	CanonicalSetDOM.addElementToSet(int j, RepositoryElement elem)
boolean	CanonicalSetPostgreSQL.addElementToSet(RepositoryElement elem)
boolean	CanonicalSetXML.addElementToSet(RepositoryElement elem)
boolean	CanonicalSetSQL.addElementToSet(RepositoryElement elem)
boolean	CanonicalSetStorage.addElementToSet(RepositoryElement elem)
boolean	CanonicalSetDOM.addElementToSet(RepositoryElement elem)
void	CanonicalSetPostgreSQL.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	CanonicalSetXML.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	CanonicalSetSQL.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	CanonicalSetStorage.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
void	CanonicalSetDOM.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this trace.
RepositoryElement	CanonicalSetPostgreSQL.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetXML.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetSQL.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetStorage.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetDOM.setElement(int j, RepositoryElement elem)

Uses of RepositoryElement in com.mockturtlesolutions.snifflib.statmodeltools.workbench

Methods in com.mockturtlesolutions.snifflib.statmodeltools.workbench that return RepositoryElement

Modifier and Type	Method and Description
RepositoryElement	CanonicalSetFrame.getElement(int j)
RepositoryElement	CanonicalSetFrame.CanonicalSetTableModel.getElement(int j)
RepositoryElement	CanonicalSetFrame.poll() Retrieves and removes the first RepositoryElement in this set, or null if this queue is empty.
RepositoryElement	CanonicalSetFrame.removeElement(int k)
RepositoryElement	CanonicalSetFrame.CanonicalSetTableModel.removeElement(int k)
RepositoryElement	CanonicalSetFrame.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetFrame.CanonicalSetTableModel.setElement(int k, RepositoryElement elem)

Methods in com.mockturtlesolutions.snifflib.statmodeltools.workbench with parameters of type RepositoryElement

Modifier and Type	Method and Description
void	CanonicalSetFrame.CanonicalSetTableModel.addElementIntoSet(int j, RepositoryElement elem)
void	CanonicalSetFrame.addElementToSet(int j, RepositoryElement elem)
boolean	CanonicalSetFrame.addElementToSet(RepositoryElement elem)
boolean	CanonicalSetFrame.CanonicalSetTableModel.addElementToSet(RepositoryElement elem)
void	CanonicalSetFrame.offer(RepositoryElement elem) Inserts the specified RepositoryElement at the end of this set.
RepositoryElement	CanonicalSetFrame.setElement(int k, RepositoryElement elem)
RepositoryElement	CanonicalSetFrame.CanonicalSetTableModel.setElement(int k, RepositoryElement elem)

Uses of RepositoryElement in com.mockturtlesolutions.snifflib.util.database

Methods in com.mockturtlesolutions.snifflib.util.database that return RepositoryElement

Modifier and Type	Method and Description
RepositoryElement	GridElementStorage.getChildGridElement(int k) Returns a RepositoryElement for the storage of the indicated child GridElementStorage.
RepositoryElement	GridElementDOM.getChildGridElement(int k)
RepositoryElement	GridElementXML.getChildGridElement(int k)
RepositoryElement	GridElementStorage.getCoordinateRepositoryElement() Gets the vertices storage for this GridElementStorage.
RepositoryElement	GridElementDOM.getCoordinateRepositoryElement()
RepositoryElement	GridElementXML.getCoordinateRepositoryElement()

Methods in com.mockturtlesolutions.snifflib.util.database with parameters of type RepositoryElement

Modifier and Type	Method and Description
void	GridElementStorage.addChildGridElement(RepositoryElement elem) Adds the specified child GridElementStorage to this storage.
void	GridElementDOM.addChildGridElement(RepositoryElement elem)
void	GridElementXML.addChildGridElement(RepositoryElement elem)
void	GridElementStorage.removeChildGridElement(RepositoryElement elem) Removes the specified child GridElementStorage from this storage.
void	GridElementDOM.removeChildGridElement(RepositoryElement elem)
void	GridElementXML.removeChildGridElement(RepositoryElement elem)
void	GridElementStorage.setCoordinateRepositoryElement(RepositoryElement elem) Specifies vertices storage for this GridElementStorage.
void	GridElementDOM.setCoordinateRepositoryElement(RepositoryElement elem)
void	GridElementXML.setCoordinateRepositoryElement(RepositoryElement elem)
void	GridElementStorage.setParentGridElement(RepositoryElement elem) Sets the parent GridElementStorage
void	GridElementDOM.setParentGridElement(RepositoryElement elem)
void	GridElementXML.setParentGridElement(RepositoryElement elem)